Package: repro 0.1.0
repro: Automated Setup of Reproducible Workflows and their Dependencies
Set up components for reproducible workflows, quickly and painlessly. Apply best practises from [Peikert & Brandmaier (2019)](<https://psyarxiv.com/8xzqy/>), [Van Lissa et. al 2020](<https://osf.io/zcvbs/>) or [The Turing Way Community](<doi.org:10.5281/zenodo.3233986>) easily in your own projects. Based upon the great [`usethis`-package](<https://github.com/r-lib/usethis>).
Authors:
repro_0.1.0.tar.gz
repro_0.1.0.zip(r-4.5)repro_0.1.0.zip(r-4.4)repro_0.1.0.zip(r-4.3)
repro_0.1.0.tgz(r-4.4-any)repro_0.1.0.tgz(r-4.3-any)
repro_0.1.0.tar.gz(r-4.5-noble)repro_0.1.0.tar.gz(r-4.4-noble)
repro_0.1.0.tgz(r-4.4-emscripten)repro_0.1.0.tgz(r-4.3-emscripten)
repro.pdf |repro.html✨
repro/json (API)
| # Install 'repro' in R: |
| install.packages('repro', repos = c('https://aaronpeikert.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/aaronpeikert/repro/issues
Last updated 2 months agofrom:54666ed2cd. Checks:OK: 1 ERROR: 6. Indexed: yes.
| Target | Result | Date |
|---|---|---|
| Doc / Vignettes | OK | Nov 08 2024 |
| R-4.5-win | ERROR | Nov 08 2024 |
| R-4.5-linux | ERROR | Nov 08 2024 |
| R-4.4-win | ERROR | Nov 08 2024 |
| R-4.4-mac | ERROR | Nov 08 2024 |
| R-4.3-win | ERROR | Nov 08 2024 |
| R-4.3-mac | ERROR | Nov 08 2024 |
Exports:automateautomate_dockerautomate_load_dataautomate_load_packagesautomate_load_scriptsautomate_makeautomate_publishcheck_brewcheck_chococheck_dockercheck_gitcheck_githubcheck_github_sshcheck_github_tokencheck_github_token_accesscheck_makecheck_packagecheck_renvcheck_sshcheck_targetscheck_worcscurrent_hashdocker_windows_pathhas_brewhas_chocohas_dockerhas_docker_runninghas_gerthas_githas_githubhas_github_sshhas_github_tokenhas_github_token_accesshas_makehas_packagehas_renvhas_sshhas_targetshas_worcsrepro_templatereproducereproduce_funsreproduce_makererunuse_dockeruse_docker_packagesuse_dockerignoreuse_gha_dockeruse_gha_publishuse_makeuse_make_dockeruse_make_publishuse_make_singularityuse_repro_templateuses_dockeruses_gha_dockeruses_gha_publishuses_makeuses_make_publishuses_make_rmds
Dependencies:askpassbase64encbslibcachemclicliprcrayoncredentialscurldescdigestevaluatefastmapfontawesomefsgertghgitcredsgluehighrhtmltoolshttr2inijquerylibjsonliteknitrlifecyclemagrittrmemoisemimeopensslpurrrR6rappdirsrlangrmarkdownrprojrootrstudioapisassstringistringrsystinytexusethisvctrswhiskerwithrxfunyamlzip
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Automate the use of Docker & Make | automate automate_docker automate_make automate_publish |
| Access repro YAML Metadata from within the document | automate_load automate_load_data automate_load_packages automate_load_scripts |
| Check System Dependencies | check check_brew check_choco check_docker check_git check_github check_github_ssh check_github_token check_github_token_access check_make check_renv check_ssh check_targets check_worcs |
| Check if package exists | check_package |
| Report Current Hash | current_hash |
| Use Docker | docker use_docker use_dockerignore |
| Generate the weird format for docker on windows. | docker_windows_path |
| Check System Dependencies | has has_brew has_choco has_docker has_docker_running has_gert has_git has_github has_github_ssh has_github_token has_github_token_access has_make has_renv has_ssh has_targets has_worcs |
| Check if package exists | has_package |
| Use Make | make use_make use_make_docker use_make_publish use_make_singularity |
| Find entrypoint for analysis and suggest how to reproduce it. | reproduce reproduce_make |
| A list of functions to detect entrypoints. | reproduce_funs |
| Find entrypoint for analysis and suggest how to reproduce it. | rerun |
| Create repro template | repro_template template use_repro_template |
| Add dependencies to Dockerfile | use_docker_packages |
| Use GitHub Action to Build Dockerimage | use_gha_docker |
| Use GitHub Action to Publish Results | use_gha_publish |
| Deal with templates that are themselves whisker templates. | use_template_template |
| Check Project Configuration | uses uses_docker uses_gha_docker uses_gha_publish uses_make uses_make_publish uses_make_rmds |
